User guides and tutorials

Statistical Inference for Partially Observed Markov Processes via the R Package pomp (a Journal of Statistical Software paper)     (PDF) (R)
Getting started with pomp     (HTML) (R)
pomp version 2 upgrade guide     (HTML)
Coding POMP models: R vs C snippets     (HTML) (R)
IF2 Pseudocode and Example     (HTML) (R)
Measles in large and small towns (He et al. 2010)     (HTML) (R) (data)
Simulation-based Inference for Epidemiological Dynamics
(a short course)
Model-based Inference in Ecology and Epidemiology (a short course)     (HTML)
Two perspectives on the pomp project     (HTML)
pomp package manual     (PDF)
pomp C API     (HTML)
Frequently Asked Questions     (HTML)
Pimp my pomp     (HTML)
Package NEWS     (HTML)


This software has been made possible by support from the U.S. National Science Foundation (Grants #EF-0545276, #EF-0430120), by the “Inference for Mechanistic Models” Working Group supported by the National Center for Ecological Analysis and Synthesis (a Center funded by N.S.F. (Grant #DEB-0553768), the University of California, Santa Barbara, and the State of California), and by the RAPIDD program of the Science & Technology Directorate, Department of Homeland Security and the Fogarty International Center, U.S. National Institutes of Health.