A number of minor changes to pomp have been made since the last blog post. Specifically, in pomp version 0.77-1:
- The deprecated
transform.params
argument tonlf
has been removed. - The deprecated
pars
andrw.sd
arguments toabc
andpmcmc
have been removed. - The deprecated
data.array
method has been removed. Useobs
instead. - The default value of
max.fail
forpmcmc
is nowInf
. That is, by defaultpmcmc
will not halt (but will issue a warning) when filtering failure occurs (i.e., no particles are consistent with the data, as defined by the likelihood thresholdtol
).