phylopomp
Phylodynamics for POMPs
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subsample.cc File Reference
#include "genealogy.h"
#include "generics.h"
#include "internal.h"
#include <R.h>
#include <Rdefines.h>
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Go to the source code of this file.

Functions

SEXP subsample (SEXP State, SEXP Frac)
 extract the bare genealogy
 

Function Documentation

◆ subsample()

SEXP subsample ( SEXP State,
SEXP Frac )

extract the bare genealogy

Definition at line 31 of file subsample.cc.

31 {
32 SEXP S;
33 genealogy_t A = State;
34 PROTECT(S = serial(A.subsample(*REAL(Frac))));
35 SET_ATTR(S,install("class"),mkString("gpgen"));
36 UNPROTECT(1);
37 return S;
38 }
Encodes a genealogy.
Definition genealogy.h:20
genealogy_t & subsample(double frac)
Definition subsample.cc:10
SEXP serial(const TYPE &X)
binary serialization
Definition generics.h:33
#define S
Definition seirs_pomp.c:38
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