phylopomp
Phylodynamics for POMPs
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decls.h
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1/* src/init.c */
2extern void R_init_phylopomp(DllInfo *);
3/* src/lbdp_pomp.c */
4extern void lbdp_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
5extern void lbdp_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
6extern void lbdp_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
7/* src/seirs_pomp.c */
8extern void seirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
9extern void seirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
10extern void seirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
11/* src/sirs_pomp.c */
12extern void sirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
13extern void sirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
14extern void sirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
15/* src/twospecies_pomp.c */
16extern void twospecies_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
17extern void twospecies_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
18extern void twospecies_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
sirs_gill
void sirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition sirs_pomp.c:91
lbdp_dmeas
void lbdp_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition lbdp_pomp.c:163
sirs_rinit
void sirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Latent-state initializer (rinit).
Definition sirs_pomp.c:69
twospecies_gill
void twospecies_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition twospecies_pomp.c:291
seirs_dmeas
void seirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition seirs_pomp.c:345
sirs_dmeas
void sirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition sirs_pomp.c:190
R_init_phylopomp
void R_init_phylopomp(DllInfo *)
Definition init.c:48
lbdp_rinit
void lbdp_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Latent-state initializer (rinit).
Definition lbdp_pomp.c:53
twospecies_rinit
void twospecies_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Definition twospecies_pomp.c:250
seirs_gill
void seirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition seirs_pomp.c:140
twospecies_dmeas
void twospecies_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition twospecies_pomp.c:635
lbdp_gill
void lbdp_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition lbdp_pomp.c:72
seirs_rinit
void seirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Definition seirs_pomp.c:115