phylopomp
Phylodynamics for POMPs
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decls.h
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1 /* src/init.c */
2 extern void R_init_phylopomp(DllInfo *);
3 /* src/lbdp_pomp.c */
4 extern void lbdp_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
5 extern void lbdp_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
6 extern void lbdp_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
7 /* src/seirs_pomp.c */
8 extern void seirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
9 extern void seirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
10 extern void seirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
11 /* src/sirs_pomp.c */
12 extern void sirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
13 extern void sirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
14 extern void sirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
15 /* src/twospecies_pomp.c */
16 extern void twospecies_rinit(double *, const double *, double, const int *, const int *, const int *, const double *);
17 extern void twospecies_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double);
18 extern void twospecies_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double);
void sirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition: sirs_pomp.c:91
void lbdp_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition: lbdp_pomp.c:163
void sirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Latent-state initializer (rinit).
Definition: sirs_pomp.c:69
void twospecies_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
void seirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition: seirs_pomp.c:345
void sirs_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
Definition: sirs_pomp.c:190
void R_init_phylopomp(DllInfo *)
Definition: init.c:48
void lbdp_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Latent-state initializer (rinit).
Definition: lbdp_pomp.c:53
void twospecies_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
void seirs_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition: seirs_pomp.c:140
void twospecies_dmeas(double *, const double *, const double *, const double *, int, const int *, const int *, const int *, const int *, const double *, double)
Measurement model likelihood (dmeasure).
void lbdp_gill(double *, const double *, const int *, const int *, const int *, const double *, double, double)
Definition: lbdp_pomp.c:72
void seirs_rinit(double *, const double *, double, const int *, const int *, const int *, const double *)
Definition: seirs_pomp.c:115