Aaron A. King on github
R
package repository at https://kingaa.github.io/
R
package repository at https://kingaa.github.io/
R package for phylodynamics
Updated Nov 15, 2024
R package for statistical inference using partially observed Markov processes
Updated Nov 15, 2024
Aaron A. King
Updated Nov 15, 2024
Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses
Updated Nov 6, 2024
Subplex Optimization Algorithm
Updated Nov 6, 2024
Miscellany
Updated Nov 6, 2024
a helper package for pomp
Updated Nov 6, 2024
the Great Tao Package
Updated Nov 6, 2024
Supporting code and data for King, Lin, & Ionides (2024) "Exact Phylodynamic Likelihood via Structured Markov Genealogy Processes"
Updated Jun 12, 2024
Supporting code and data for Frontiers MS "Red blood cell dynamics during malaria infection violate the assumptions of mathematical models of infection dynamics"
Updated May 10, 2024
Training Program in Quantitative Ecology
Updated Mar 4, 2024
Simulation-based Inference for Epidemiological Dynamics
Updated Apr 25, 2024
A Tutorial Introduction to R
Updated Sep 6, 2023
Some useful Mathematica add-on packages
Updated Apr 30, 2024
Model-based Inference in Ecology and Epidemiology
Updated Nov 12, 2020
Materials for ICTP Workshop on Mathematical Models of Climate Variability, Environmental Change and Infectious Diseases
Updated Apr 15, 2020
Supporting material for Bjørnstad, Viboud, Grenfell, King (2020) "Comparison of alternative models of human movement and the spread of disease"
Updated Jun 28, 2022
POMP models for genetic data
Updated Apr 28, 2017
Modelling measles spatial spread with a competing-risks framework
Updated Apr 28, 2020
Supporting material for the paper "The impact of past vaccination coverage and immunity on pertussis resurgence", M. Domenech de Cellès, F. M. G. Magpantay, A. A. King, and P. Rohani, Science Translational Medicine 10(434): eaaj1748, 2018. https://doi.org/10.1126/scitranslmed.aaj1748
Updated Mar 19, 2018
Visit-day Scheduler
Updated Aug 17, 2017