phylopomp
Phylodynamics for POMPs
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- _ -
_deme :
ball_t
_green_ball :
node_t
_holder :
ball_t
_inven :
inventory_t< NDEME >
_lineage :
node_t
_ndeme :
genealogy_t
_owner :
ball_t
_t0 :
genealogy_t
_time :
genealogy_t
_unique :
genealogy_t
- b -
b1 :
s2i2r2_parameters_t
,
twospecies_parameters_t
b2 :
s2i2r2_parameters_t
,
twospecies_parameters_t
Beta :
seir_parameters_t
,
si2r_parameters_t
,
sir_parameters_t
Beta1 :
siir_parameters_t
Beta11 :
s2i2r2_parameters_t
,
twospecies_parameters_t
Beta12 :
s2i2r2_parameters_t
,
twospecies_parameters_t
Beta2 :
siir_parameters_t
Beta21 :
twospecies_parameters_t
Beta22 :
s2i2r2_parameters_t
,
twospecies_parameters_t
bytesize :
ball_t
- c -
c1 :
twospecies_parameters_t
c2 :
twospecies_parameters_t
color :
ball_t
current :
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
- d -
d1 :
s2i2r2_parameters_t
,
twospecies_parameters_t
d2 :
s2i2r2_parameters_t
,
twospecies_parameters_t
- e -
E :
seir_state_t
E0 :
seir_parameters_t
event :
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
- g -
g :
moran_state_t
gamma :
seir_parameters_t
,
si2r_parameters_t
,
siir_parameters_t
,
sir_parameters_t
gamma1 :
s2i2r2_parameters_t
,
twospecies_parameters_t
gamma2 :
s2i2r2_parameters_t
,
twospecies_parameters_t
geneal :
master_t< POPN, NDEME >
- i -
I :
seir_state_t
,
sir_state_t
I0 :
seir_parameters_t
,
si2r_parameters_t
,
sir_parameters_t
I1 :
s2i2r2_state_t
,
si2r_state_t
,
siir_state_t
,
twospecies_state_t
I1_0 :
s2i2r2_parameters_t
,
siir_parameters_t
,
twospecies_parameters_t
I2 :
s2i2r2_state_t
,
si2r_state_t
,
siir_state_t
,
twospecies_state_t
I2_0 :
s2i2r2_parameters_t
,
siir_parameters_t
,
twospecies_parameters_t
inventory :
master_t< POPN, NDEME >
iota1 :
s2i2r2_parameters_t
,
twospecies_parameters_t
iota2 :
s2i2r2_parameters_t
,
twospecies_parameters_t
- l -
lambda :
lbdp_parameters_t
- m -
m :
moran_state_t
magic :
genealogy_t
mu :
lbdp_parameters_t
,
moran_parameters_t
,
si2r_parameters_t
- n -
n :
lbdp_state_t
,
moran_parameters_t
N :
seir_state_t
,
si2r_state_t
,
siir_state_t
,
sir_state_t
n0 :
lbdp_parameters_t
N1 :
s2i2r2_state_t
,
twospecies_state_t
N2 :
s2i2r2_state_t
,
twospecies_state_t
ndeme :
inventory_t< NDEME >
,
master_t< POPN, NDEME >
,
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
nevent :
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
next :
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
- o -
omega :
seir_parameters_t
,
si2r_parameters_t
,
siir_parameters_t
,
sir_parameters_t
omega1 :
s2i2r2_parameters_t
,
twospecies_parameters_t
omega2 :
s2i2r2_parameters_t
,
twospecies_parameters_t
- p -
params :
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
psi :
lbdp_parameters_t
,
moran_parameters_t
,
seir_parameters_t
,
sir_parameters_t
psi1 :
s2i2r2_parameters_t
,
si2r_parameters_t
,
siir_parameters_t
,
twospecies_parameters_t
psi2 :
s2i2r2_parameters_t
,
si2r_parameters_t
,
siir_parameters_t
,
twospecies_parameters_t
- r -
R :
seir_state_t
,
si2r_state_t
,
siir_state_t
,
sir_state_t
R0 :
seir_parameters_t
,
si2r_parameters_t
,
siir_parameters_t
,
sir_parameters_t
R1 :
s2i2r2_state_t
,
twospecies_state_t
R1_0 :
s2i2r2_parameters_t
,
twospecies_parameters_t
R2 :
s2i2r2_state_t
,
twospecies_state_t
R2_0 :
s2i2r2_parameters_t
,
twospecies_parameters_t
- s -
S :
seir_state_t
,
si2r_state_t
,
siir_state_t
,
sir_state_t
S0 :
seir_parameters_t
,
si2r_parameters_t
,
siir_parameters_t
,
sir_parameters_t
S1 :
s2i2r2_state_t
,
twospecies_state_t
S1_0 :
s2i2r2_parameters_t
,
twospecies_parameters_t
S2 :
s2i2r2_state_t
,
twospecies_state_t
S2_0 :
s2i2r2_parameters_t
,
twospecies_parameters_t
sigma :
seir_parameters_t
sigma12 :
si2r_parameters_t
,
siir_parameters_t
sigma21 :
si2r_parameters_t
,
siir_parameters_t
slate :
node_t
state :
popul_proc_t< STATE, PARAMETERS, NEVENT, NDEME >
- u -
uniq :
ball_t
,
node_t
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