| ouch-package | Ornstein-Uhlenbeck methods for comparative phylogenetic hypotheses |
| anolis.ssd | Greater Antillean anolis lizard sexual size dimorphism data |
| ape2ouch | Phylogenetic tree object in 'ouch' format |
| as.data.frame.browntree | Coerce an 'ouch' object to a data frame |
| as.data.frame.hansentree | Coerce an 'ouch' object to a data frame |
| as.data.frame.ouchtree | Coerce an 'ouch' object to a data frame |
| as_data_frame | Coerce an 'ouch' object to a data frame |
| bimac | Anolis bimaculatus lizard size data |
| bootstrap | Bootstrapping for uncertainty quantification |
| bootstrap-method | Bootstrapping for uncertainty quantification |
| brown | Phylogenetic Brownian motion models |
| browntree-class | Phylogenetic Brownian motion models |
| coef | Model coefficients |
| coef-method | Model coefficients |
| geospiza | Data on Darwin's finches |
| hansen | Ornstein-Uhlenbeck models of trait evolution |
| hansentree-class | Ornstein-Uhlenbeck models of trait evolution |
| logLik | Log likelihood of a fitted model |
| logLik-method | Log likelihood of a fitted model |
| ouch | Ornstein-Uhlenbeck methods for comparative phylogenetic hypotheses |
| ouch,package | Ornstein-Uhlenbeck methods for comparative phylogenetic hypotheses |
| ouchtree | Phylogenetic tree object in 'ouch' format |
| ouchtree-class | Phylogenetic tree object in 'ouch' format |
| paint | Painting regimes on a phylogenetic tree |
| plot | 'ouch' plotting functions |
| plot-method | 'ouch' plotting functions |
| simulate | Simulations of a phylogenetic trait model |
| simulate-method | Simulations of a phylogenetic trait model |
| summary | 'ouch' summary methods |
| summary-method | 'ouch' summary methods |
| update | Update and refit an 'ouch' model |
| update-method | Update and refit an 'ouch' model |